[api-dev] failed agave job

[Barthelson, Roger A - (rogerab)]

This is what I see if I run jobs-history -v, which does include time references, but I guess they are for TACC time, which seems to be different from CyVerse time.

Roger

[rogerab at hratius ~]$ jobs-history -v 5870516747098526181-ee4acae9fffff7a7-0001-007
[
    {
        "created": "2016-02-08T19:13:30.000-06:00",
        "description": "Job accepted and queued for submission.",
        "status": "PENDING"
    },
    {
        "created": "2016-02-08T19:44:46.000-06:00",
        "description": "Input staging for job is current paused due to quota restrictions. System stampede.tacc.utexas.edu is currently at maximum capacity for concurrent active jobs.. This job will resume staging once one or more current jobs complete.",
        "status": "PENDING"
    },
    {
        "created": "2016-02-08T21:30:02.000-06:00",
        "description": "Attempt 1 to stage job inputs",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T21:30:02.000-06:00",
        "description": "Identifying input files for staging",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T21:30:06.000-06:00",
        "description": "Copy in progress",
        "progress": {
            "averageRate": 9118092.0,
            "source": "agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr1_EntGenome_S1_L001_R1_001.fastq",
            "totalActiveTransfers": 0,
            "totalBytes": 17087305558,
            "totalBytesTransferred": 17087305558,
            "totalFiles": 1,
            "uuid": "7614193479804850661-ee4acae9fffff7a7-0001-009"
        },
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T22:39:53.000-06:00",
        "description": "Attempt 1 failed to stage job inputs. Failed to transfer input agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr2_EntGenome_S1_L001_R2_001.fastq",
        "status": "PENDING"
    },
    {
        "created": "2016-02-08T22:39:54.000-06:00",
        "description": "Attempt 2 to stage job inputs",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T22:39:54.000-06:00",
        "description": "Identifying input files for staging",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T22:39:56.000-06:00",
        "description": "Copy in progress",
        "progress": {
            "averageRate": 8733429.0,
            "source": "agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr1_EntGenome_S1_L001_R1_001.fastq",
            "totalActiveTransfers": 1,
            "totalBytes": 17087305558,
            "totalBytesTransferred": 14925430784,
            "totalFiles": 1,
            "uuid": "3094801429486309861-ee4acae9fffff7a7-0001-009"
        },
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T23:08:27.000-06:00",
        "description": "Attempt 2 failed to stage job inputs. Failed to transfer input agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr1_EntGenome_S1_L001_R1_001.fastq",
        "status": "PENDING"
    },
    {
        "created": "2016-02-08T23:08:28.000-06:00",
        "description": "Attempt 3 to stage job inputs",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T23:08:28.000-06:00",
        "description": "Identifying input files for staging",
        "status": "PROCESSING_INPUTS"
    },
    {
        "created": "2016-02-08T23:08:31.000-06:00",
        "description": "Copy in progress",
        "progress": {
            "averageRate": 6721471.0,
            "source": "agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr1_EntGenome_S1_L001_R1_001.fastq",
            "totalActiveTransfers": 1,
            "totalBytes": 17087305558,
            "totalBytesTransferred": 2130706432,
            "totalFiles": 1,
            "uuid": "2971066926382125541-ee4acae9fffff7a7-0001-009"
        },
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T23:13:51.000-06:00",
        "description": "Attempt 3 failed to stage job inputs. Failed to transfer input agave://data.iplantcollaborative.org/matthewterry/Ent_Genome/HTProcess_trimmomatic_0.32_Ent_Genome-2015-06-25-15-48-02.5/HTProcess_Reads_T1/TrmPr1_EntGenome_S1_L001_R1_001.fastq",
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T23:13:52.000-06:00",
        "description": "Cleaning up remote work directory.",
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T23:13:53.000-06:00",
        "description": "Completed cleaning up remote work directory.",
        "status": "STAGING_INPUTS"
    },
    {
        "created": "2016-02-08T23:13:53.000-06:00",
        "description": "Unable to stage inputs for job after 3 attempts. Job cancelled.",
        "status": "FAILED"
    }
]

--
Roger Barthelson Ph.D.

Scientific Analyst

CyVerse

rogerab at cyverse.org

TEL:+1-520-977-5249

http://www.cyverse.org<http://www.iplantcollaborative.org/>

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