[Iplant-api-dev] new fastqc app failure

[Khalfan, Mohammed]

cornel at green400:~/work/dnalc/iPlant-FoundationalAPI (master)$ perl examples/test-apps.pl dnalc-fastqc-osg-0.10.1  /ghiban/SRX030195_slim.fastq

---------------------------------------------------------
Looking for application dnalc-fastqc-osg-0.10.1
---------------------------------------------------------

Found [dnalc-fastqc-osg-0.10.1] - dnalc-fastqc-osg | a quality control tool for high throughput sequence data.
    Inputs:
        input - FASTQ sequence library 1


---------------------------------------------------------
Submitting a 'dnalc-fastqc-osg-0.10.1' job; input = /ghiban/SRX030195_slim.fastq
---------------------------------------------------------
$VAR1 = {
          'input' => '/ghiban/SRX030195_slim.fastq',
          'archive' => 1,
          'jobName' => 'job 798',
          'requestedTime' => '1:00:00'
        };


---------------------------------------------------------
Job submitted: API job id = 0001386358370282-5056831b44-0001-007
---------------------------------------------------------
status: PENDING
status: STAGING_INPUTS
status: SUBMITTING
status: SUBMITTING
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: QUEUED
status: RUNNING
status: RUNNING
status: RUNNING
status: FAILED
message: Killed remaining processes and clean up the remote job
cornel at green400:~/work/dnalc/iPlant-FoundationalAPI (master)$

On 12/06/2013 02:24 PM, Khalfan, Mohammed wrote:


From: Rion Dooley [mailto:dooley at tacc.utexas.edu]
Sent: Friday, December 06, 2013 2:20 PM
To: Khalfan, Mohammed
Subject: iplant developer's mailing list

iplant-api-dev at iplantcollaborative.org<mailto:iplant-api-dev at iplantcollaborative.org>

http://mail.iplantcollaborative.org/mailman/listinfo/iplant-api-dev

--
Rion